Chemo-, Bioinformatics’ and Bioengineering Tools in Heritage Science: Repositories and Vocabularies
DOI:
https://doi.org/10.55630/dipp.2025.15.25Keywords:
Heritage Science, Chemoinformatic, Bioinformatics, Bio-Engineering, Convergent TechnologiesAbstract
In recent years nano-, bio-, info-, and cognitive technologies signed significant advances in improvement the beneficial properties of natural biological objects and the creation of entirely new ones that do not exist in nature. This paper examines some of the IT opportunities developed in this process such as databases, vocabularies and linked data, in view of their potential to enable the transition of heritage science to a fundamentally new line — use of renewable supplies and technologies, modelled in respect to the art works’ nature, to ecological and to health save norms.References
Andrusenko, S. F., Avanessian, S. S., Kravzova, E. Yu., & Perfil'eva, O. O. (2009). Prigotovlenie i issledovanie svoystv pektinsoderzhashchikh kompleksov [Preparation and investigation of the properties of pectin-containing complexes]. In N. G. Bazarnova & V. I. Markin (Eds.), Novye dostizheniya v khimii i khimicheskoy tekhnologii rastitel'nogo syr'ya: Materialy IV Vserossiyskoy konferentsii, 21–23 aprelya 2009 g., Kniga 1 [New achievements in chemistry and chemical technology of plant raw materials: Proceedings of the IV All-Russian Conference, April 21–23, 2009, Book 1] (pp. 113–115). Barnaul: Altai University Publishing House.
BCC Research. (2023). Bioinformatics: Technologies and global markets. BCC Publishing.
Csermely, P., Korcsmáros, T., Kiss, H. J., London, G., & Nussinov, R. (2013). Structure and dynamics of molecular networks: A novel paradigm of drug discovery. Pharmacology & Therapeutics, 138 (3), 333–408.
Gauthier, J., Vincent, A. T., Charette, S. J., & others. (2019). A brief history of bioinformatics. Briefings in Bioinformatics, 20 (6), 1981–1996. https://doi.org/10.1093/bib/bby063
Kolesnikov, I., Nikolenko, M. V., Ermakov, A. V., & others. (2023). National Genomic Information Database. Nanobiotekhnologicheskie izvestiya [Nanobiotechnology Reports], 18, 329–336.
Kotel'nikova, N. E. (2009). Mikrokristallicheskaya tsellyuloza. Ot otkrytiya do sovremennykh issledovaniy [Microcrystalline cellulose: From discovery to the latest research]. In N. G. Bazarnova & V. I. Markin (Eds.), Novye dostizheniya v khimii i khimicheskoy tekhnologii rastitel'nogo syr'ya: Materialy IV Vserossiyskoy konferentsii, 21–23 aprelya 2009 g., Kniga 1 [New achievements in chemistry and chemical technology of plant raw materials: Proceedings of the IV All-Russian Conference, April 21–23, 2009, Book 1] (p. 42). Barnaul: Altai University Publishing House.
Lagunin, A., Goel, R. K., Gawande, D. Y., & others. (2014). Chemo- and bioinformatics resources for in silico drug discovery from medicinal plants beyond their traditional use: A critical review. Natural Product Reports, 31 (11), 1585–1611.
Nawaz, M. A., Pamirsky, I. E., & Golokhvast, K. S. (2024). Bioinformatics in Russia: History and present-day landscape. Briefings in Bioinformatics, 25 (6). https://doi.org/10.1093/bib/bbae077
Newman, D. J., & Cragg, G. M. (2007). Natural products as sources of new drugs over the last 25 years. Journal of Natural Products, 70 (3), 461–477.
Prakash, O., Khan, F., Sangwan, R. S., & Misra, L. (2013). Chemo-informatics approach in natural product-based drug discovery. Combinatorial Chemistry & High Throughput Screening, 16 (1), 57–67.
Rogoza, L. N. (2005). Alkaloids from animal origin. I. Bioorganicheskaya khimiya [Bioorganic Chemistry], 31 (5), 563–577.
Rogoza, L. N. (2006). Alkaloids from animal origin. II. Bioorganicheskaya khimiya [Bioorganic Chemistry], 32 (1), 27–41.
Rollinger, J. M., Schuster, D., Danzl, B., & others. (2009). In silico target fishing for natural products: Discovery of chemokine receptor ligands. Planta Medica, 75 (2), 195–204.
Sakthivel, G. D., Dey, A., Nongalleima, Kh., Chavali, M., & others. (2013). Plant-derived bioactive compounds for cancer therapy: Insights from in silico and in vitro approaches. Evidence-Based Complementary and Alternative Medicine, Article ID 781216. https://doi.org/10.1155/2013/781216
Stoyanova, M. (2007). I cuoi “bulgari” a Venezia. In C. L. Masi (Ed.), L’Europa Centro-Orientale e la Penisola italiana: quattro secoli di rapporti e influssi intercorsi tra Stati e civiltà (1300–1700) (pp. 309–322). Editions of the Romanian Institute in Venice.
Stoyanova, M. (2008). Written sources on Coptic dyeing methods. Journal of Coptic Studies, 10, 99–112. https://doi.org/10.2143/JCS.10.0.2030848
Stoyanova, M. (2009). Tecnologia ed arte dal Levane in Europa, XV–XVII secoli. München: Grin Verlag.
Stoyanova, M., Luchev, D., & Paneva-Marinova, D. (2016). Optimization of natural dyes’ non-contact characterization and interdisciplinary application using ensemble classifiers and genetic algorithms. Digital Presentation and Preservation of Cultural and Scientific Heritage Conference Proceedings, 6, 147–160.
Stoyanova, M., Pavlova, L., Paneva-Marinova, D., & Pavlov, R. (2014). The IFIDA project: Intelligent Fast Interconnected Devices and Tools for Applications in Archaeometry and Conservation Practice. Digital Presentation and Preservation of Cultural and Scientific Heritage Conference Proceedings, 4, 256–262.
Tanaka, T., Mine, C., Watarumi, S., Fujioka, T., Mihashi, K., Zhang, Y. J., & Kuono, I. (2002). Accumulation of epigallocatechin quinone during tea fermentation and formation of teasinensis. Journal of Natural Products, 65 (11), 1582–1587.
Yadav, D. K., Meena, A., Srivastava, A., & others. (2010). Docking and molecular dynamics studies on substituted chalcones as potential anticancer agents. Drug Design, Development and Therapy, 4, 173–186.
Yadav, D. K., Khan, F., & Negi, A. S. (2012). Interactions of natural products with enzymes involved in metabolic syndrome: Molecular docking and dynamics studies. Journal of Molecular Modeling, 18 (5), 2153–2165.
Zemnukhova, L. A. (2009). Kremniyorganicheskie soedineniya iz rasteniy i ikh svoystva [Silicon-containing compounds from plants and their properties]. In N. G. Bazarnova & V. I. Markin (Eds.), Novye dostizheniya v khimii i khimicheskoy tekhnologii rastitel'nogo syr'ya: Materialy IV Vserossiyskoy konferentsii, 21–23 aprelya 2009 g., Kniga 1 [New achievements in chemistry and chemical technology of plant raw materials: Proceedings of the IV All-Russian Conference, April 21–23, 2009, Book 1] (p. 280). Barnaul: Altai University Publishing House
Zerdoun Bat-Yehuda, M. (1983). Les encres. CNRS Editions.
Zhao, J. J., Jiang, P., & Zhang, W. (2010). Bioinformatics analysis of gene expression profiles: Application to cancer research. Briefings in Bioinformatics, 11 (5), 417– 426.
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